[Xplor-nih] calculating RMSD for NOE restraints

[John Kuszewski]

The value reported by the classic xplor command "noe print threshold"  
as the RMS violation is
calculated using ALL restraints, including those with zero violation.

--JK

On Oct 30, 2006, at 2:08 PM, blueoak at berkeley.edu wrote:

> Hi,
>
> Does anyone which restraints XPLOR uses to calculate the RMDS for noe
> restraints? Does it use ALL restraints in the calculation or ONLY  
> the ones
> that are violated?
>
> Thank you for your help in advance.
> Michaeleen
>
>
> _______________________________________________
> Xplor-nih mailing list
> Xplor-nih at nmr.cit.nih.gov
> http://dcb.cit.nih.gov/mailman/listinfo/xplor-nih