[Xplor-nih] ANI atoms after structure calculation
Charles at Schwieters.org
Charles at Schwieters.org
Thu Aug 9 10:57:56 EDT 2007
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Hello Marco--
>
> xplor-nih adds these lines in my pdb file after the simulated annealing.
>
> ATOM 121 X ANI 500 -0.514 -1.098 -0.555 1.00 1.00 AXIS
> ATOM 122 Y ANI 500 -0.252 -2.006 0.496 1.00 1.00 AXIS
> ATOM 123 Z ANI 500 0.594 -0.890 0.299 1.00 1.00 AXIS
> ATOM 124 OO ANI 500 0.274 -1.645 -0.274 1.00 1.00 AXIS
> ATOM 125 OO2 ANI 500 0.274 -1.645 -0.274 1.00 1.00 AXIS
> ATOM 126 PA1 ANI 500 -0.023 -0.992 -0.970 1.00 1.00 AXIS
> ATOM 127 PA2 ANI 500 -0.544 -1.183 -0.616 1.00 1.00 AXIS
>
> I have no clue why xplor is doing this. My annealing script ist based on
> xplor-nih/eginput/gb1_rdc/anneal.py.
>
these correspond to pseudoatoms used to describe the RDC alignment
tensor. They can normally be ignored.
best regards--
Charles
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