[Xplor-nih] ambiguous distance restraint violations
Charles at Schwieters.org
Charles at Schwieters.org
Mon Dec 10 12:27:56 EST 2007
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Hello Jakob--
> I am testing a refinement protocol using ambiguous distance restraints
> editing the "~/eginput/gb1_rdc/refine.py" xplor-nih python script
> template.
> Most of my ambigous distance restraints contain the OR syntax (here
> ambiguous hydrogen bonds):
> -------------------------------
> assign (resid 14 and name O) (resid 2 and name HN) 1.00 1.00 1.00 OR
> (resid 15 and name HN) (resid 2 and name O) OR
> (resid 14 and name O) (resid 3 and name HN) OR
> (resid 15 and name HN) (resid 3 and name O) OR
Assuming your using version 2.18, I believe the Python potential
requires these ORs to be on new lines. If this is a significant
restriction, it should be straightforward to allow the syntax you're
using. Anyone have thoughts on this?
best regards--
Charles
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