[Xplor-nih] sge

[Charles at Schwieters.org]

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Hello Gary--

> 
> I have had to write this into my submisasion script to get it to work 
> with a very simle (make) parallel  environment
> 
> while read line; do
> machines="$machines $line"
> done < <(cat $PE_HOSTFILE | cut -d' ' -f1,1)
> 
> /home/garyt/programs/xplor-nih/2.17.0/bin/xplor -parallel -machines 
> "$machines" < $PWD/test_par.inp

what is the format of the PE_HOSTFILE? It looks like you might be able
to just do: 

xplor -parallel -machines $PE_HOSTFILE $PWD/test_par.inp

But perhaps a small tweak is necessary to bin/xplor, like the attached
diff. 

Please let me know how it goes.

best regards--
Charles


***************
*** 391,397 ****
  export PROGNAME
  
  if [ -f "$MACHINES" ]; then
!     MACHINES=`grep -v ^# $MACHINES`
  fi
  
  
- --- 391,397 ----
  export PROGNAME
  
  if [ -f "$MACHINES" ]; then
!     MACHINES=`grep -v ^# $MACHINES | cut -d' ' -f1`
  fi
  
  
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