[Xplor-nih] Standard formats of PDB ??
R.M. van der Werf
R.vanderWerf at nmr.ru.nl
Wed Oct 3 04:22:38 EDT 2007
Hi,
Perhaps this is a stupid question, but I do wonder why
- Xplor cannot read PDBs as provided by the protein databank?
- Xplor output is not PDB standard as required for submission to the
protein databank.
Example, an Xplor-pdb ATOM line looks like:
ATOM 7 H5'' GUA 1 305.922 17.032 -97.545 1.00 0.00
EDHB
The last element is the segment ID.
Wheras the line for the protein databank looks like (taken from another
PDB from the databank):
ATOM 22 2H5* G A 1 -12.277 -10.770 5.000 1.00 0.00
H
Or is there an easy way to change the output to PDB(tm) standard, which
I may have overlooked ?
Regards,
Ramon
More information about the Xplor-nih
mailing list