[Xplor-nih] paiwise RMSD

[Charles at Schwieters.org]

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Hello Nah--

> Any **ppts, pdfs, learning materials, inputs ** will be highly appreciated. 
> 

Are you aware of http://nmr.cit.nih.gov/xplor-nih/doc/current/? In
particular the python interface tutorial should be useful. I agree that
more/better documentation would be a useful addition. The problem is
time. 


> Also, how to calculate the Radius of Gyration (of a given PDB &/or a
> structure generated by Xplor)
> 

This is done automatically by the
protocol.initCollapse helper function. The formula can be found in its
help entry. 

Also, please see 
http://pubs.acs.org/cgi-bin/abstract.cgi/jpcbfk/asap/abs/jp076244o.html

best regards--
Charles
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