[Xplor-nih] Process: Irregular Exit ?

[Nah Sivar]

Thanks Dr.Schwieters, just protocol.genExtendedStructure() 
seems to be solving the problem. So, guess, it's an error due to some processes attempting to write to the file simultaneously and thus failing and exiting.



Charles at schwieters.org wrote: -----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1


Hello Nah--

> The system architecture is : X86_64 (Linux 64bit). and have 'pasted' the
> script below your comments.

Are you running on a cluster, or locally?

>     protocol.genExtendedStructure("gb1_extended_%d.pdb" % seed)
> 
> the last command is what is causing 'some' of the processes to irregularly
> exit.
> If I remove the argument (gb1_extended_%d.pdb" % seed), will some of the
> multiple processes still attempt to write ?
> 

does it work ok if you change the line to
protocol.genExtendedStructure()

??

thanks--
Charles




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