XPLOR interface module
 
Useful methods:
 
from xplorWrap.XplorWrap:
  command(string,names) - call XplorWrap.command(). 
  shell()               - invoke the XPLOR interpreter
 
Useful members:
 
  simulation: an instance of xplorSimulation.XplorSimulation which 
              represents the atomic structure state within XPLOR.
  wrap:       an instance of xplorWrap.xplorWrap
 
 
python interface intialization script
 
this should not normally be modified by users.
 
this executes in module ``xplor''

Functions
		command(c, r=()) fastCommand(c, r=()) call xplorWrap.XplorWrap.fastCommand     help() parseArguments(options=[]) process extra Xplor-NIH command-line arguments.     Mistyped options will be detected.     Additional options can be specified using the options argument.   Options start with a single or double dash. Option can have one or more   arguments, the number of which is specified by a number separated by a   colon from the option name.     Options present on the command-line but which are not specified in the   options argument will cause an error.     The return value is (optlist,args), where     optlist is [(option, arg1, arg2..), ...]     and args are the remaining command-line arguments after options have     been parsed.     example:     (optlist,args) = parseArguments(["help-script","outfile:1"])         pyConfigFile(name) return the full path of a .xplornih configuration file whose filename   is name    rcDir() return the path of the Xplor-NIH configuration directory.     If the directory does not exist, create it    rcPyDir() return the path of the Xplor-NIH configuration directory.     If the directory does not exist, create it    requireVersion(vStr) prints warning and exits if the current Xplor-NIH version is less than   that specified in vStr.    writeConsole(msg) write a message to the user's console - file descriptor number 9.     This is stdout from where the xplor command is typed.      writeExitMessage()

Data
		allowStartupFailures = 1 arg1 = '/home/schwitrs/xplor/python/xplorDoc.py' argN = 'publicIVM' argv = ['/home/schwitrs/xplor/bin.Linux_2.6_x86_64/xplor', '/home/schwitrs/xplor/python/xplorDoc.py', '-w', 'xplor', 'ivm', 'monteCarlo', 'trace', 'trajFile', 'selectLogic', 'selectTools', 'xplorInit', 'vmdInter', 'checkWrap', 'hybridMC', 'atomAction', 'potCosAngleRatio', 'rdcPotTools', 'simulationTools', 'shapePotTools', 'pck2xplor', ...] cnt = 1 e = '/home/schwitrs/opt/python-amd64/lib/python2.5/site-packages' env = {'LESS': '-X', 'TOPPAR_C22': '/home/schwitrs/xpl...ttp://www.hec.utah.edu/~schwitrs/bookmarks.html'} exitMessage = '' newargv = ['-w', 'xplor', 'ivm', 'monteCarlo', 'trace', 'trajFile', 'selectLogic', 'selectTools', 'xplorInit', 'vmdInter', 'checkWrap', 'hybridMC', 'atomAction', 'potCosAngleRatio', 'rdcPotTools', 'simulationTools', 'shapePotTools', 'pck2xplor', 'protocol', 'varTensorTools', ...] p_comm = <socketComm.Comm instance at 0xc967a0> p_host0 = 'localhost' p_numProcs = 1 p_port = 9021 p_processID = 0 pre = '2.21' progName = '/home/schwitrs/xplor/python/xplorDoc.py' scriptName = '/home/schwitrs/xplor/python/xplorDoc.py' simPtr = <C XplorSimulation instance at _6079a70000000000_p_XplorSimulation> simulation = <C XplorSimulation instance at _6079a70000000000_p_XplorSimulation> tmp = ['.', '/home/schwitrs/xplor-bzr/bin.Linux_2.6_x86_64', '/net/cake/public/htdocs/nmr.cit.nih.gov/xplor-nih/doc/2.21/python/ref', '/home/schwitrs/xplor/bin.Linux_2.6_x86_64', '/home/schwitrs/xplor/python', '/home/schwitrs/xplor/python/wrappers', '/home/schwitrs/xplor/python/bin.Linux_2.6_x86_64', '/home/schwitrs/lib/python', '/home/schwitrs/opt/python-amd64/lib/python25.zip', '/home/schwitrs/opt/python-amd64/lib/python2.5', '/home/schwitrs/opt/python-amd64/lib/python2.5/plat-linux2', '/home/schwitrs/opt/python-amd64/lib/python2.5/lib-tk', '/home/schwitrs/opt/python-amd64/lib/python2.5/lib-dynload', '/home/schwitrs/opt/python-amd64/lib/python2.5/site-packages', '/home/schwitrs/.xplornih/python'] version = '2.21' version_info = [2, 21] wrap = <C XplorWrap instance at _20eda10000000000_p_XplorWrap> wrapPtr = <C XplorWrap instance at _20eda10000000000_p_XplorWrap>