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Analysis of Conformational Energy
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XPLOR Interface Manual
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Example: Interchain Interaction Energy
Geometric and Energetic Analysis
Subsections
Analysis of Conformational Energy Terms
Syntax of the Print Statement
Syntax of the Pick Statement
Requirements
Example: Print Bond Length and Bond Angle Deviations
Example: Print All Bonds of a Selected Set of Atoms
Example: Pick Bond Geometry
Example: Pick Distance between Two Atoms
Example: Pick Bond Angle among Three Atoms
Analysis of the Nonbonded Energy Terms
Syntax
Requirements
Example: Distances between Selected Residues
Deviations from Ideality and Crystal Packing
Conformation vs. Residue Number
Ramachandran Plot
Accessible Surface Area
Syntax
Requirements
Example
Xplor-NIH 2008-09-11
