| | |
- asciiHistogram(data, minVal=None, maxVal=None, numBins=20, numRows=20, title='Histogram', numXdigits=4, numTrailingLines=2, useIntegerBins=False)
- Return a string containing an ASCII-art histogram.
- chooseBestFraction(namesCoords, peakList, completenessPots=[], frac=0.1, violCutoff=0.5, inverseBound=0, inverseMethylCorrection=0.0, completenessWeight=0, useNonviolCount=False)
- Given a list of <filename, atomPosArray> pairs,
check each one's violations of a given set of peaks
and return a list of the frac% best <filename, atomPosArray> pairs
- formatPercent(val, tot, width=None)
- Return string reporting number, total and percent
- reportNOEaccuracy(pot, refStructFile, violCutoff, highLikeliCut, lowLikeliCut=None, longRangeCut=6)
- Return a string reporting peak's agreement with a reference structure.
- reportNOEprecision(pot, heavyatomSel, highLikelihoodCut, lowLikelihoodCut=None, longRangeCut=6, tclOutput=False)
- Return string reporting NOE precision statistics -
the number of high-likelihood long-range peaks per residue in
the atom selection heavyatomSel
And the NOE discrimination- the fraction of long-range peaks with
likelihoods either above highLikelihodCut or below lowLikelihodCut.
- whichBin(val, minVal, maxVal, numBins)
|
