Skip to main content
U.S. flag

An official website of the United States government

Here’s how you know

Official government website icon

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

icon-https

Secure .gov websites use HTTPS
A lock ( Lock Locked padlock icon )or https:// means you’ve safely connected to the .gov website. Share sensitive information only on official, secure websites.

NIH: National Institute of Diabetes and Digestive and Kidney Diseases NIH: National Institute of Diabetes and Digestive and Kidney Diseases

  next up previous contents index  Xplor-NIH home Documentation

Next: Syntax Up: XPLOR Interface Manual Previous: Example: a viral RNA


Electron Density Maps

The xrefin map statement computes an electron density map from $F_c=F_{calc}+F_{part}$. It uses the FFT method at the specified resolution. The user can specify boundaries to reduce the size of the map that is written to the output file. Of particular interest is the MOLEcule=EXTEnd option to write a map that covers selected atoms of the molecule.

Subsections
  • Syntax
  • Requirements
  • Electron Density Map File
  • Example: Computation of a $2F_{obs}-F_{calc}$ Map
  • Example: Computation of an Omit Map
  • Example: Computation of an Annealed Omit Map
  • Example: Heavy Atom Derivative Difference Map


Xplor-NIH 2025-03-21
  • Privacy Policy
  • Freedom of Information Act
  • Accessibility
  • Disclaimers
  • Copyright
  • Vulnerability Disclosure Policy
  • U.S. Department of Health and Human Services
  • National Institutes of Health