jCoupPot
index
jCoupPot.py


J-Coupling Potential term
 
Constructor:
  JCoupPot(instanceName ,
           restraints   ,
           simulation   )  - creates a potential term with the given name.
                             restraints is a string which contains a restraint
                             table (defaults to an empty string).
                             simulation defaults to 
                             simulation.currentSimulation.
 
Methods:
  calcEnergy()                    - calcs energy
  calcEnergyAndDerivs(DerivList)  - calcs energy and derivative info
    note that these routines also update all other potential-specific data.
 
  addRestraints(restraints)- add entries to the restraint table.
 
Read-Write Accessors:
  A         - coefficient of cos^2 term (see formula below).
  B         - coefficient of cos term (see formula below).
  C         - constant term (see formula below).
  phase     - phase in j-coupling formula (see formula below).
  potType   - potential type: 'harmonic' or 'square' [harmonic].
  verbose   - if true, sporadically spit out info [False]
  threshold - threshold in violation calculation ( defaults to 0).
  showAllRestraints - boolean which changes the behavior of showViolations. If 
                      this parameter is set to True, the behavior of
                      showViolations is modified such that all restraints are
                      printed. Violated restraints are indicated by an
                      asterisk in the first column. [1]
 
Read-only accessors:
 
  violations()    - return number of violations. Defined in terms of jDiff_i.
  rms()           - return rms of jDiff_i
  numRestraints() - the number of restraints defined for this term.
  deviation()     - ensemble deviation of jCalc-jObs averaged over all 
                    restraints
 
  simulation()    - simulation used by this shape term. Is an EnsembleSimulation.
 
  info()                   - return string synopsis of potential info.
  showRestraints(violated) - return pretty-printed restraint info.
  showViolations()         - return pretty-printed violation info.
 
 
The potential term is defined as
 
  E = scale() * sum_i jDiff_i^2
 
where
   jDiff = jCalc - jDiff  if potType=='harmonic'
 
   if potType=='square, jDiff is
       jCalc-jObs-jPlus    if jCalc-jObs>jPlus
       jCalc-jObs+jMinus   if jCalc-jObs<-jMinus
             0             otherwise
 
  jObs is the observed j-coupling value.
  jCalc is the ensemble-average calulated j-coupling value:
 
      jCalc = A*cos(phi+phase)^2 + B*cos(phi+phase) + C
 
    where the constants A,B,C, and phase are inputs, and phi is the dihedral
    angle as specified in the assignment table.
 
 
The j-coupling assignment table consists of entries of the following form
 
ASSIgn  (sel1) (sel2) (sel3) (sel4) jObs jMinus [jPlus]
 
where the four single atom selections specify the dihedral angle. jMinus
and jPlus specify the range of the square potential, with jPlus defaulting
to jMinus if it is omitted.
 
 
Note that the degenerate assignments of the XPLOR COUP term are not
implemented here yet.
 

 
Classes
       
__builtin__.object
CDSList_JCoup_Restraint
CDSList_JCoup_RestraintPtr
JCoupPot
JCoupPotPtr
JCoupPot_LetterClass
JCoupPot_LetterClassPtr
Modified
ModifiedPtr
ModifiedBase
ModifiedBasePtr
Restraint_JCoupPot
JCoup_Restraint
JCoup_RestraintPtr
Restraint_JCoupPotPtr
rc_ptr_JCoup_Restraint
rc_ptr_JCoup_RestraintPtr

 
class CDSList_JCoup_Restraint(__builtin__.object)
     Methods defined here:
__del__(self, destroy=<built-in function delete_CDSList_JCoup_Restraint>)
__delitem__(*args)
__getattr__ lambda self, name
__getitem__(*args)
__getslice__(*args)
__init__(self, *args)
__len__(*args)
__repr__(self)
__setattr__ lambda self, name, value
__setitem__(*args)
help(*args)

Data and other attributes defined here:
__dict__ = <dictproxy object at 0x13411a0>
dictionary for instance variables (if defined)
__swig_getmethods__ = {}
__swig_setmethods__ = {}
__weakref__ = <attribute '__weakref__' of 'CDSList_JCoup_Restraint' objects>
list of weak references to the object (if defined)

 
class CDSList_JCoup_RestraintPtr(CDSList_JCoup_Restraint)
    
Method resolution order:
CDSList_JCoup_RestraintPtr
CDSList_JCoup_Restraint
__builtin__.object

Methods defined here:
__init__(self, this)

Methods inherited from CDSList_JCoup_Restraint:
__del__(self, destroy=<built-in function delete_CDSList_JCoup_Restraint>)
__delitem__(*args)
__getattr__ lambda self, name
__getitem__(*args)
__getslice__(*args)
__len__(*args)
__repr__(self)
__setattr__ lambda self, name, value
__setitem__(*args)
help(*args)

Data and other attributes inherited from CDSList_JCoup_Restraint:
__dict__ = <dictproxy object at 0x13410f8>
dictionary for instance variables (if defined)
__swig_getmethods__ = {}
__swig_setmethods__ = {}
__weakref__ = <attribute '__weakref__' of 'CDSList_JCoup_Restraint' objects>
list of weak references to the object (if defined)

 
class JCoupPot(__builtin__.object)
     Methods defined here:
A(*args)
B(*args)
C(*args)
__del__(self, destroy=<built-in function delete_JCoupPot>)
__deref__(*args)
__getattr__ lambda self, name
__init__(self, *args)
__mul__(*args)
__oldinit__ = __init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
addRestraints(*args)
calcEnergy(*args)
calcEnergyAndDerivs(*args)
deviation(*args)
energyMaybeDerivs0(*args)
energyMaybeDerivs1(*args)
energyMaybeDerivs2(*args)
energyMaybeDerivs3(*args)
energyMaybeDerivs4(*args)
help(*args)
incrRefCount(*args)
info(*args)
instanceData(*args)
instanceName(*args)
numRestraints(*args)
phase(*args)
pointer(*args)
potName(*args)
potType(*args)
registerInstanceData(*args)
registerTo(*args)
resetPotName(*args)
restraints(*args)
rms(*args)
scale(*args)
setA(*args)
setB(*args)
setC(*args)
setPhase(*args)
setPotType(*args)
setScale(*args)
setShowAllRestraints(*args)
setThreshold(*args)
setVerbose(*args)
showAllRestraints(*args)
showRestraints(*args)
showViolations(*args)
simulation(*args)
threshold(*args)
unRegister(*args)
updateValues(*args)
verbose(*args)
violations(*args)

Properties defined here:
instanceData_
get = JCoupPot_instanceData__get(...)
set = JCoupPot_instanceData__set(...)
modified
get = JCoupPot_modified_get(...)
set = JCoupPot_modified_set(...)
phaseInRadians
get = JCoupPot_phaseInRadians_get(...)
set = JCoupPot_phaseInRadians_set(...)
registeredSimulations
get = JCoupPot_registeredSimulations_get(...)
set = JCoupPot_registeredSimulations_set(...)

Data and other attributes defined here:
__dict__ = <dictproxy object at 0x13413d0>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'instanceData_': <built-in function JCoupPot_instanceData__get>, 'modified': <built-in function JCoupPot_modified_get>, 'phaseInRadians': <built-in function JCoupPot_phaseInRadians_get>, 'registeredSimulations': <built-in function JCoupPot_registeredSimulations_get>}
__swig_setmethods__ = {'instanceData_': <built-in function JCoupPot_instanceData__set>, 'modified': <built-in function JCoupPot_modified_set>, 'phaseInRadians': <built-in function JCoupPot_phaseInRadians_set>, 'registeredSimulations': <built-in function JCoupPot_registeredSimulations_set>}
__weakref__ = <attribute '__weakref__' of 'JCoupPot' objects>
list of weak references to the object (if defined)

 
class JCoupPotPtr(JCoupPot)
    
Method resolution order:
JCoupPotPtr
JCoupPot
__builtin__.object

Methods defined here:
__init__(self, this)

Methods inherited from JCoupPot:
A(*args)
B(*args)
C(*args)
__del__(self, destroy=<built-in function delete_JCoupPot>)
__deref__(*args)
__getattr__ lambda self, name
__mul__(*args)
__oldinit__ = __init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
addRestraints(*args)
calcEnergy(*args)
calcEnergyAndDerivs(*args)
deviation(*args)
energyMaybeDerivs0(*args)
energyMaybeDerivs1(*args)
energyMaybeDerivs2(*args)
energyMaybeDerivs3(*args)
energyMaybeDerivs4(*args)
help(*args)
incrRefCount(*args)
info(*args)
instanceData(*args)
instanceName(*args)
numRestraints(*args)
phase(*args)
pointer(*args)
potName(*args)
potType(*args)
registerInstanceData(*args)
registerTo(*args)
resetPotName(*args)
restraints(*args)
rms(*args)
scale(*args)
setA(*args)
setB(*args)
setC(*args)
setPhase(*args)
setPotType(*args)
setScale(*args)
setShowAllRestraints(*args)
setThreshold(*args)
setVerbose(*args)
showAllRestraints(*args)
showRestraints(*args)
showViolations(*args)
simulation(*args)
threshold(*args)
unRegister(*args)
updateValues(*args)
verbose(*args)
violations(*args)

Properties inherited from JCoupPot:
instanceData_
get = JCoupPot_instanceData__get(...)
set = JCoupPot_instanceData__set(...)
modified
get = JCoupPot_modified_get(...)
set = JCoupPot_modified_set(...)
phaseInRadians
get = JCoupPot_phaseInRadians_get(...)
set = JCoupPot_phaseInRadians_set(...)
registeredSimulations
get = JCoupPot_registeredSimulations_get(...)
set = JCoupPot_registeredSimulations_set(...)

Data and other attributes inherited from JCoupPot:
__dict__ = <dictproxy object at 0x1341210>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'instanceData_': <built-in function JCoupPot_instanceData__get>, 'modified': <built-in function JCoupPot_modified_get>, 'phaseInRadians': <built-in function JCoupPot_phaseInRadians_get>, 'registeredSimulations': <built-in function JCoupPot_registeredSimulations_get>}
__swig_setmethods__ = {'instanceData_': <built-in function JCoupPot_instanceData__set>, 'modified': <built-in function JCoupPot_modified_set>, 'phaseInRadians': <built-in function JCoupPot_phaseInRadians_set>, 'registeredSimulations': <built-in function JCoupPot_registeredSimulations_set>}
__weakref__ = <attribute '__weakref__' of 'JCoupPot' objects>
list of weak references to the object (if defined)

 
class JCoupPot_LetterClass(__builtin__.object)
     Methods defined here:
A(*args)
B(*args)
C(*args)
__del__(self, destroy=<built-in function delete_JCoupPot_LetterClass>)
__getattr__ lambda self, name
__init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
addRestraints(*args)
deviation(*args)
energyMaybeDerivs0(*args)
energyMaybeDerivs1(*args)
energyMaybeDerivs2(*args)
help(*args)
info(*args)
numRestraints(*args)
phase(*args)
potType(*args)
restraints(*args)
rms(*args)
setA(*args)
setB(*args)
setC(*args)
setPhase(*args)
setPotType(*args)
setShowAllRestraints(*args)
setThreshold(*args)
setVerbose(*args)
showAllRestraints(*args)
showRestraints(*args)
showViolations(*args)
threshold(*args)
verbose(*args)
violations(*args)

Properties defined here:
phaseInRadians
get = JCoupPot_LetterClass_phaseInRadians_get(...)
set = JCoupPot_LetterClass_phaseInRadians_set(...)

Data and other attributes defined here:
HARMONIC = 0
SQUARE = 1
__dict__ = <dictproxy object at 0x1341280>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'phaseInRadians': <built-in function JCoupPot_LetterClass_phaseInRadians_get>}
__swig_setmethods__ = {'phaseInRadians': <built-in function JCoupPot_LetterClass_phaseInRadians_set>}
__weakref__ = <attribute '__weakref__' of 'JCoupPot_LetterClass' objects>
list of weak references to the object (if defined)

 
class JCoupPot_LetterClassPtr(JCoupPot_LetterClass)
    
Method resolution order:
JCoupPot_LetterClassPtr
JCoupPot_LetterClass
__builtin__.object

Methods defined here:
__init__(self, this)

Methods inherited from JCoupPot_LetterClass:
A(*args)
B(*args)
C(*args)
__del__(self, destroy=<built-in function delete_JCoupPot_LetterClass>)
__getattr__ lambda self, name
__repr__(self)
__setattr__ lambda self, name, value
addRestraints(*args)
deviation(*args)
energyMaybeDerivs0(*args)
energyMaybeDerivs1(*args)
energyMaybeDerivs2(*args)
help(*args)
info(*args)
numRestraints(*args)
phase(*args)
potType(*args)
restraints(*args)
rms(*args)
setA(*args)
setB(*args)
setC(*args)
setPhase(*args)
setPotType(*args)
setShowAllRestraints(*args)
setThreshold(*args)
setVerbose(*args)
showAllRestraints(*args)
showRestraints(*args)
showViolations(*args)
threshold(*args)
verbose(*args)
violations(*args)

Properties inherited from JCoupPot_LetterClass:
phaseInRadians
get = JCoupPot_LetterClass_phaseInRadians_get(...)
set = JCoupPot_LetterClass_phaseInRadians_set(...)

Data and other attributes inherited from JCoupPot_LetterClass:
HARMONIC = 0
SQUARE = 1
__dict__ = <dictproxy object at 0x1341328>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'phaseInRadians': <built-in function JCoupPot_LetterClass_phaseInRadians_get>}
__swig_setmethods__ = {'phaseInRadians': <built-in function JCoupPot_LetterClass_phaseInRadians_set>}
__weakref__ = <attribute '__weakref__' of 'JCoupPot_LetterClass' objects>
list of weak references to the object (if defined)

 
class JCoup_Restraint(Restraint_JCoupPot)
    
Method resolution order:
JCoup_Restraint
Restraint_JCoupPot
__builtin__.object

Methods defined here:
__del__(self, destroy=<built-in function delete_JCoup_Restraint>)
__getattr__ lambda self, name
__init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
calcContrib(*args)
deriv(*args)
energy(*args)
name(*args)
ok(*args)

Properties defined here:
contrib
get = JCoup_Restraint_contrib_get(...)
set = JCoup_Restraint_contrib_set(...)
verbose
get = JCoup_Restraint_verbose_get(...)
set = JCoup_Restraint_verbose_set(...)

Data and other attributes defined here:
__swig_getmethods__ = {'contrib': <built-in function JCoup_Restraint_contrib_get>, 'verbose': <built-in function JCoup_Restraint_verbose_get>}
__swig_setmethods__ = {'contrib': <built-in function JCoup_Restraint_contrib_set>, 'verbose': <built-in function JCoup_Restraint_verbose_set>}

Methods inherited from Restraint_JCoupPot:
diff(*args)
setName(*args)
violated(*args)

Data and other attributes inherited from Restraint_JCoupPot:
__dict__ = <dictproxy object at 0x13412b8>
dictionary for instance variables (if defined)
__weakref__ = <attribute '__weakref__' of 'Restraint_JCoupPot' objects>
list of weak references to the object (if defined)

 
class JCoup_RestraintPtr(JCoup_Restraint)
    
Method resolution order:
JCoup_RestraintPtr
JCoup_Restraint
Restraint_JCoupPot
__builtin__.object

Methods defined here:
__init__(self, this)

Methods inherited from JCoup_Restraint:
__del__(self, destroy=<built-in function delete_JCoup_Restraint>)
__getattr__ lambda self, name
__repr__(self)
__setattr__ lambda self, name, value
calcContrib(*args)
deriv(*args)
energy(*args)
name(*args)
ok(*args)

Properties inherited from JCoup_Restraint:
contrib
get = JCoup_Restraint_contrib_get(...)
set = JCoup_Restraint_contrib_set(...)
verbose
get = JCoup_Restraint_verbose_get(...)
set = JCoup_Restraint_verbose_set(...)

Data and other attributes inherited from JCoup_Restraint:
__swig_getmethods__ = {'contrib': <built-in function JCoup_Restraint_contrib_get>, 'verbose': <built-in function JCoup_Restraint_verbose_get>}
__swig_setmethods__ = {'contrib': <built-in function JCoup_Restraint_contrib_set>, 'verbose': <built-in function JCoup_Restraint_verbose_set>}

Methods inherited from Restraint_JCoupPot:
diff(*args)
setName(*args)
violated(*args)

Data and other attributes inherited from Restraint_JCoupPot:
__dict__ = <dictproxy object at 0x13412f0>
dictionary for instance variables (if defined)
__weakref__ = <attribute '__weakref__' of 'Restraint_JCoupPot' objects>
list of weak references to the object (if defined)

 
class Modified(__builtin__.object)
     Methods defined here:
__call__(*args)
__del__(self, destroy=<built-in function delete_Modified>)
__getattr__ lambda self, name
__init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
clear(*args)
set(*args)
update(*args)
value(*args)

Data and other attributes defined here:
MOD_SELF = 1
MOD_SIMULATION = 2
__dict__ = <dictproxy object at 0x1341130>
dictionary for instance variables (if defined)
__swig_getmethods__ = {}
__swig_setmethods__ = {}
__weakref__ = <attribute '__weakref__' of 'Modified' objects>
list of weak references to the object (if defined)

 
class ModifiedBase(__builtin__.object)
     Methods defined here:
__del__(self, destroy=<built-in function delete_ModifiedBase>)
__getattr__ lambda self, name
__init__(self)
__repr__(self)
__setattr__ lambda self, name, value
registerTo(*args)
unRegister(*args)
updateValues(*args)

Properties defined here:
modified
get = ModifiedBase_modified_get(...)
set = ModifiedBase_modified_set(...)
registeredSimulations
get = ModifiedBase_registeredSimulations_get(...)
set = ModifiedBase_registeredSimulations_set(...)

Data and other attributes defined here:
__dict__ = <dictproxy object at 0x1341280>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'modified': <built-in function ModifiedBase_modified_get>, 'registeredSimulations': <built-in function ModifiedBase_registeredSimulations_get>}
__swig_setmethods__ = {'modified': <built-in function ModifiedBase_modified_set>, 'registeredSimulations': <built-in function ModifiedBase_registeredSimulations_set>}
__weakref__ = <attribute '__weakref__' of 'ModifiedBase' objects>
list of weak references to the object (if defined)

 
class ModifiedBasePtr(ModifiedBase)
    
Method resolution order:
ModifiedBasePtr
ModifiedBase
__builtin__.object

Methods defined here:
__init__(self, this)

Methods inherited from ModifiedBase:
__del__(self, destroy=<built-in function delete_ModifiedBase>)
__getattr__ lambda self, name
__repr__(self)
__setattr__ lambda self, name, value
registerTo(*args)
unRegister(*args)
updateValues(*args)

Properties inherited from ModifiedBase:
modified
get = ModifiedBase_modified_get(...)
set = ModifiedBase_modified_set(...)
registeredSimulations
get = ModifiedBase_registeredSimulations_get(...)
set = ModifiedBase_registeredSimulations_set(...)

Data and other attributes inherited from ModifiedBase:
__dict__ = <dictproxy object at 0x13412f0>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'modified': <built-in function ModifiedBase_modified_get>, 'registeredSimulations': <built-in function ModifiedBase_registeredSimulations_get>}
__swig_setmethods__ = {'modified': <built-in function ModifiedBase_modified_set>, 'registeredSimulations': <built-in function ModifiedBase_registeredSimulations_set>}
__weakref__ = <attribute '__weakref__' of 'ModifiedBase' objects>
list of weak references to the object (if defined)

 
class ModifiedPtr(Modified)
    
Method resolution order:
ModifiedPtr
Modified
__builtin__.object

Methods defined here:
__init__(self, this)

Methods inherited from Modified:
__call__(*args)
__del__(self, destroy=<built-in function delete_Modified>)
__getattr__ lambda self, name
__repr__(self)
__setattr__ lambda self, name, value
clear(*args)
set(*args)
update(*args)
value(*args)

Data and other attributes inherited from Modified:
MOD_SELF = 1
MOD_SIMULATION = 2
__dict__ = <dictproxy object at 0x13412f0>
dictionary for instance variables (if defined)
__swig_getmethods__ = {}
__swig_setmethods__ = {}
__weakref__ = <attribute '__weakref__' of 'Modified' objects>
list of weak references to the object (if defined)

 
class Restraint_JCoupPot(__builtin__.object)
     Methods defined here:
__del__(self, destroy=<built-in function delete_Restraint_JCoupPot>)
__getattr__ lambda self, name
__init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
diff(*args)
name(*args)
setName(*args)
violated(*args)

Data and other attributes defined here:
__dict__ = <dictproxy object at 0x13412b8>
dictionary for instance variables (if defined)
__swig_getmethods__ = {}
__swig_setmethods__ = {}
__weakref__ = <attribute '__weakref__' of 'Restraint_JCoupPot' objects>
list of weak references to the object (if defined)

 
class Restraint_JCoupPotPtr(Restraint_JCoupPot)
    
Method resolution order:
Restraint_JCoupPotPtr
Restraint_JCoupPot
__builtin__.object

Methods defined here:
__init__(self, this)

Methods inherited from Restraint_JCoupPot:
__del__(self, destroy=<built-in function delete_Restraint_JCoupPot>)
__getattr__ lambda self, name
__repr__(self)
__setattr__ lambda self, name, value
diff(*args)
name(*args)
setName(*args)
violated(*args)

Data and other attributes inherited from Restraint_JCoupPot:
__dict__ = <dictproxy object at 0x1341168>
dictionary for instance variables (if defined)
__swig_getmethods__ = {}
__swig_setmethods__ = {}
__weakref__ = <attribute '__weakref__' of 'Restraint_JCoupPot' objects>
list of weak references to the object (if defined)

 
class rc_ptr_JCoup_Restraint(__builtin__.object)
     Methods defined here:
__del__(self, destroy=<built-in function delete_rc_ptr_JCoup_Restraint>)
__deref__(*args)
__getattr__ lambda self, name
__init__(self, *args)
__mul__(*args)
__repr__(self)
__setattr__ lambda self, name, value
calcContrib(*args)
count(*args)
decr(*args)
deriv(*args)
diff(*args)
energy(*args)
incr(*args)
name(*args)
ok(*args)
ptr(*args)
reset(*args)
setName(*args)
violated(*args)

Properties defined here:
contrib
get = rc_ptr_JCoup_Restraint_contrib_get(...)
set = rc_ptr_JCoup_Restraint_contrib_set(...)
verbose
get = rc_ptr_JCoup_Restraint_verbose_get(...)
set = rc_ptr_JCoup_Restraint_verbose_set(...)

Data and other attributes defined here:
__dict__ = <dictproxy object at 0x13412f0>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'contrib': <built-in function rc_ptr_JCoup_Restraint_contrib_get>, 'verbose': <built-in function rc_ptr_JCoup_Restraint_verbose_get>}
__swig_setmethods__ = {'contrib': <built-in function rc_ptr_JCoup_Restraint_contrib_set>, 'verbose': <built-in function rc_ptr_JCoup_Restraint_verbose_set>}
__weakref__ = <attribute '__weakref__' of 'rc_ptr_JCoup_Restraint' objects>
list of weak references to the object (if defined)

 
class rc_ptr_JCoup_RestraintPtr(rc_ptr_JCoup_Restraint)
    
Method resolution order:
rc_ptr_JCoup_RestraintPtr
rc_ptr_JCoup_Restraint
__builtin__.object

Methods defined here:
__init__(self, this)

Methods inherited from rc_ptr_JCoup_Restraint:
__del__(self, destroy=<built-in function delete_rc_ptr_JCoup_Restraint>)
__deref__(*args)
__getattr__ lambda self, name
__mul__(*args)
__repr__(self)
__setattr__ lambda self, name, value
calcContrib(*args)
count(*args)
decr(*args)
deriv(*args)
diff(*args)
energy(*args)
incr(*args)
name(*args)
ok(*args)
ptr(*args)
reset(*args)
setName(*args)
violated(*args)

Properties inherited from rc_ptr_JCoup_Restraint:
contrib
get = rc_ptr_JCoup_Restraint_contrib_get(...)
set = rc_ptr_JCoup_Restraint_contrib_set(...)
verbose
get = rc_ptr_JCoup_Restraint_verbose_get(...)
set = rc_ptr_JCoup_Restraint_verbose_set(...)

Data and other attributes inherited from rc_ptr_JCoup_Restraint:
__dict__ = <dictproxy object at 0x1341360>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'contrib': <built-in function rc_ptr_JCoup_Restraint_contrib_get>, 'verbose': <built-in function rc_ptr_JCoup_Restraint_verbose_get>}
__swig_setmethods__ = {'contrib': <built-in function rc_ptr_JCoup_Restraint_contrib_set>, 'verbose': <built-in function rc_ptr_JCoup_Restraint_verbose_set>}
__weakref__ = <attribute '__weakref__' of 'rc_ptr_JCoup_Restraint' objects>
list of weak references to the object (if defined)

 
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