varTensor		index
varTensor.py

variable magnitude orientational tensor object
 
This object is usually constructed using the create_VarTensor() function in 
the varTensorTools module. The VarTensor object is used by 
rdcPot.RDCPot and csaPot.CSAPot potential terms.
 
 The following parameters can be set [defaults in square brackets]
 
  Da        - axial tensor component. Setting this modifies ths position of 
              the p1 atom.
  Rh        - rhombic tensor component. Setting this modifies ths position of 
              the p2 atom.
  DaMax            - maximum possible value of Da [50]
  verbose   - if true, sporadically spit out info [False]
  oAtom            - origin atom
  o2Atom    - origin atom #2 (see below)
  xAtom            - x-axis atom
  yAtom            - y-axis atom
  zAtom            - z-axis atom
  p1Atom    - Da parameter atom
  p2Atom    - rhombicity parameter atom
  potType   - type of potential: "harmonic" or "square" ["harmonic"]
  expts     - the potentials (RDCPots and CSAPots) which depend on this 
              tensor.
  freedom   - string used by varTensorTools.topologySetup to setup IVM
              topology.
 
 the above quantities may be retrieved using the member function form
 quantity(), while they are set using the form setQuantity(value).
 
 
if the associated Simulation object is an EnsembleSimulation, additional
functionality is available:
 
accessors:
 
  ensembleAxis - boolean. If true, there is a separate value for tensor
                 axis orientation for each ensemble member. True values
                 are not yet supported for refinement. Default is 0(false).
  ensembleDa - boolean. If true, there is a separate value of Da for 
               each structure. Default is 0(false).
  ensembleRh - boolean. If true, there is a separate value of rhombicity for 
               each structure. Default is 0(false).
  scaleDa    - weight on an energy term which weights spread in
               Da. This is only meaningful if ensembleDa is on. [default: 0]
  scaleRh    - weight on an energy term which weights spread in
               rhombicity. This is only meaningful if ensembleRh is on. 
               [default: 0]
  spreadDa   - Target spread in Da. Deviations in Da of less than
               spreadDa (from the mean) do not count towards the Da
               spread energy term. [default value: 0]
  spreadRh   - Target spread in rhombicity. Deviations in rhombicity
               of less than spreadRh (from the mean) do not count
               towards the rhombicity spread energy term. [default value: 0]
 
In addition the followiong methods are provided:
 
 aveDa()         - return the average value of Da
 aveRhombicity() - return the average value of rhombicity
 
The energy term associated with spread in Da and Rh is
     scaleDa * < harmonicSquare( Da - <Da> ) >
and
     scaleRh * < harmonicSquare( Rh - <Rh> ) >,
respectively.
 
 
 Implementation: required topology issues
 
 The VarTensor object is best used with the IVM module for coordinate
 minimization and manipulation. An example of such use is shown in the
 rdcPotTest.py script in the python/tests subdirectory. To exploit the full
 capabilities of the VarTensor object, seven atoms are used to represent
 tensor properties. A second origin atom (named OO2) is placed
 co-incident with atom OO. 
 
  The axial tensor component Da is represented as 
                    Da_max * cos(theta1)
 where theta1 is the angle defined by atomX-atomOO-atomPA1. The
 rhombic tensor component is represented by 
                    2/3 * sin(theta2)
 where theta2 is the angle defined by atomZ-atomOO2-atomPA2.
 
 

 
Classes
       
__builtin__.object
Modified
ModifiedPtr
ModifiedBase
ModifiedBasePtr
VarTensor
VarTensorPtr
VarTensor_LetterClass
VarTensor_LetterClassPtr

 
class Modified(__builtin__.object)
     Methods defined here:
__call__(*args)
__del__(self, destroy=<built-in function delete_Modified>)
__getattr__ lambda self, name
__init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
clear(*args)
set(*args)
update(*args)
value(*args)
Data and other attributes defined here:
MOD_SELF = 1
MOD_SIMULATION = 2
__dict__ = <dictproxy object at 0x13cd050>
dictionary for instance variables (if defined)
__swig_getmethods__ = {}
__swig_setmethods__ = {}
__weakref__ = <attribute '__weakref__' of 'Modified' objects>
list of weak references to the object (if defined)

 
class ModifiedBase(__builtin__.object)
     Methods defined here:
__del__(self, destroy=<built-in function delete_ModifiedBase>)
__getattr__ lambda self, name
__init__(self)
__repr__(self)
__setattr__ lambda self, name, value
registerTo(*args)
unRegister(*args)
updateValues(*args)
Properties defined here:
modified
get = ModifiedBase_modified_get(...)
set = ModifiedBase_modified_set(...)
registeredSimulations
get = ModifiedBase_registeredSimulations_get(...)
set = ModifiedBase_registeredSimulations_set(...)
Data and other attributes defined here:
__dict__ = <dictproxy object at 0x13a8cc8>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'modified': <built-in function ModifiedBase_modified_get>, 'registeredSimulations': <built-in function ModifiedBase_registeredSimulations_get>}
__swig_setmethods__ = {'modified': <built-in function ModifiedBase_modified_set>, 'registeredSimulations': <built-in function ModifiedBase_registeredSimulations_set>}
__weakref__ = <attribute '__weakref__' of 'ModifiedBase' objects>
list of weak references to the object (if defined)

 
class ModifiedBasePtr(ModifiedBase)
    
Method resolution order:
ModifiedBasePtr
ModifiedBase
__builtin__.object
Methods defined here:
__init__(self, this)
Methods inherited from ModifiedBase:
__del__(self, destroy=<built-in function delete_ModifiedBase>)
__getattr__ lambda self, name
__repr__(self)
__setattr__ lambda self, name, value
registerTo(*args)
unRegister(*args)
updateValues(*args)
Properties inherited from ModifiedBase:
modified
get = ModifiedBase_modified_get(...)
set = ModifiedBase_modified_set(...)
registeredSimulations
get = ModifiedBase_registeredSimulations_get(...)
set = ModifiedBase_registeredSimulations_set(...)
Data and other attributes inherited from ModifiedBase:
__dict__ = <dictproxy object at 0x13a8da8>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'modified': <built-in function ModifiedBase_modified_get>, 'registeredSimulations': <built-in function ModifiedBase_registeredSimulations_get>}
__swig_setmethods__ = {'modified': <built-in function ModifiedBase_modified_set>, 'registeredSimulations': <built-in function ModifiedBase_registeredSimulations_set>}
__weakref__ = <attribute '__weakref__' of 'ModifiedBase' objects>
list of weak references to the object (if defined)

 
class ModifiedPtr(Modified)
    
Method resolution order:
ModifiedPtr
Modified
__builtin__.object
Methods defined here:
__init__(self, this)
Methods inherited from Modified:
__call__(*args)
__del__(self, destroy=<built-in function delete_Modified>)
__getattr__ lambda self, name
__repr__(self)
__setattr__ lambda self, name, value
clear(*args)
set(*args)
update(*args)
value(*args)
Data and other attributes inherited from Modified:
MOD_SELF = 1
MOD_SIMULATION = 2
__dict__ = <dictproxy object at 0x13a8da8>
dictionary for instance variables (if defined)
__swig_getmethods__ = {}
__swig_setmethods__ = {}
__weakref__ = <attribute '__weakref__' of 'Modified' objects>
list of weak references to the object (if defined)

 
class VarTensor(__builtin__.object)
     Methods defined here:
Da(*args)
DaMax(*args)
Rh(*args)
__del__(self, destroy=<built-in function delete_VarTensor>)
__deref__(*args)
__getattr__ lambda self, name
__init__(self, *args)
__mul__(*args)
__oldinit__ = __init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
accumDerivs(*args)
aveDa(*args)
aveRh(*args)
calcEnergy(*args)
calcEnergyAndDerivs(*args)
configTensorAtoms(*args)
energyMaybeDerivs0(*args)
energyMaybeDerivs1(*args)
energyMaybeDerivs2(*args)
energyMaybeDerivs3(*args)
energyMaybeDerivs4(*args)
ensembleAxis(*args)
ensembleDa(*args)
ensembleRh(*args)
expts(*args)
freedom(*args)
help(*args)
incrRefCount(*args)
info(*args)
initDerivs(*args)
instanceData(*args)
instanceName(*args)
numRestraints(*args)
o2Atom(*args)
oAtom(*args)
p1Atom(*args)
p2Atom(*args)
pointer(*args)
potName(*args)
registerInstanceData(*args)
registerTo(*args)
resetPotName(*args)
rms(*args)
scale(*args)
scaleDa(*args)
scaleRh(*args)
setDa(*args)
setDaMax(*args)
setEnsembleAxis(*args)
setEnsembleDa(*args)
setEnsembleRh(*args)
setExpts(*args)
setFreedom(*args)
setO2Atom(*args)
setOAtom(*args)
setP1Atom(*args)
setP2Atom(*args)
setRh(*args)
setScale(*args)
setScaleDa(*args)
setScaleRh(*args)
setSpreadDa(*args)
setSpreadRh(*args)
setThreshold(*args)
setXAtom(*args)
setYAtom(*args)
setZAtom(*args)
simulation(*args)
spreadDa(*args)
spreadRh(*args)
threshold(*args)
unRegister(*args)
updateValues(*args)
violations(*args)
xAtom(*args)
yAtom(*args)
zAtom(*args)
Properties defined here:
DaMax_
get = VarTensor_DaMax__get(...)
set = VarTensor_DaMax__set(...)
U
get = VarTensor_U_get(...)
set = VarTensor_U_set(...)
dO
get = VarTensor_dO_get(...)
set = VarTensor_dO_set(...)
dP1
get = VarTensor_dP1_get(...)
set = VarTensor_dP1_set(...)
dP2
get = VarTensor_dP2_get(...)
set = VarTensor_dP2_set(...)
dX
get = VarTensor_dX_get(...)
set = VarTensor_dX_set(...)
dY
get = VarTensor_dY_get(...)
set = VarTensor_dY_set(...)
dZ
get = VarTensor_dZ_get(...)
set = VarTensor_dZ_set(...)
instanceData_
get = VarTensor_instanceData__get(...)
set = VarTensor_instanceData__set(...)
modified
get = VarTensor_modified_get(...)
set = VarTensor_modified_set(...)
normQ
get = VarTensor_normQ_get(...)
set = VarTensor_normQ_set(...)
normQp1
get = VarTensor_normQp1_get(...)
set = VarTensor_normQp1_set(...)
normQp2
get = VarTensor_normQp2_get(...)
set = VarTensor_normQp2_set(...)
qp1
get = VarTensor_qp1_get(...)
set = VarTensor_qp1_set(...)
qp2
get = VarTensor_qp2_get(...)
set = VarTensor_qp2_set(...)
registeredSimulations
get = VarTensor_registeredSimulations_get(...)
set = VarTensor_registeredSimulations_set(...)
sqrtOneMinusZP1Squared
get = VarTensor_sqrtOneMinusZP1Squared_get(...)
set = VarTensor_sqrtOneMinusZP1Squared_set(...)
xp1hat
get = VarTensor_xp1hat_get(...)
set = VarTensor_xp1hat_set(...)
zp1hat
get = VarTensor_zp1hat_get(...)
set = VarTensor_zp1hat_set(...)
zp2hat
get = VarTensor_zp2hat_get(...)
set = VarTensor_zp2hat_set(...)
Data and other attributes defined here:
__dict__ = <dictproxy object at 0x13cd520>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'DaMax_': <built-in function VarTensor_DaMax__get>, 'U': <built-in function VarTensor_U_get>, 'dO': <built-in function VarTensor_dO_get>, 'dP1': <built-in function VarTensor_dP1_get>, 'dP2': <built-in function VarTensor_dP2_get>, 'dX': <built-in function VarTensor_dX_get>, 'dY': <built-in function VarTensor_dY_get>, 'dZ': <built-in function VarTensor_dZ_get>, 'instanceData_': <built-in function VarTensor_instanceData__get>, 'modified': <built-in function VarTensor_modified_get>, ...}
__swig_setmethods__ = {'DaMax_': <built-in function VarTensor_DaMax__set>, 'U': <built-in function VarTensor_U_set>, 'dO': <built-in function VarTensor_dO_set>, 'dP1': <built-in function VarTensor_dP1_set>, 'dP2': <built-in function VarTensor_dP2_set>, 'dX': <built-in function VarTensor_dX_set>, 'dY': <built-in function VarTensor_dY_set>, 'dZ': <built-in function VarTensor_dZ_set>, 'instanceData_': <built-in function VarTensor_instanceData__set>, 'modified': <built-in function VarTensor_modified_set>, ...}
__weakref__ = <attribute '__weakref__' of 'VarTensor' objects>
list of weak references to the object (if defined)

 
class VarTensorPtr(VarTensor)
    
Method resolution order:
VarTensorPtr
VarTensor
__builtin__.object
Methods defined here:
__init__(self, this)
Methods inherited from VarTensor:
Da(*args)
DaMax(*args)
Rh(*args)
__del__(self, destroy=<built-in function delete_VarTensor>)
__deref__(*args)
__getattr__ lambda self, name
__mul__(*args)
__oldinit__ = __init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
accumDerivs(*args)
aveDa(*args)
aveRh(*args)
calcEnergy(*args)
calcEnergyAndDerivs(*args)
configTensorAtoms(*args)
energyMaybeDerivs0(*args)
energyMaybeDerivs1(*args)
energyMaybeDerivs2(*args)
energyMaybeDerivs3(*args)
energyMaybeDerivs4(*args)
ensembleAxis(*args)
ensembleDa(*args)
ensembleRh(*args)
expts(*args)
freedom(*args)
help(*args)
incrRefCount(*args)
info(*args)
initDerivs(*args)
instanceData(*args)
instanceName(*args)
numRestraints(*args)
o2Atom(*args)
oAtom(*args)
p1Atom(*args)
p2Atom(*args)
pointer(*args)
potName(*args)
registerInstanceData(*args)
registerTo(*args)
resetPotName(*args)
rms(*args)
scale(*args)
scaleDa(*args)
scaleRh(*args)
setDa(*args)
setDaMax(*args)
setEnsembleAxis(*args)
setEnsembleDa(*args)
setEnsembleRh(*args)
setExpts(*args)
setFreedom(*args)
setO2Atom(*args)
setOAtom(*args)
setP1Atom(*args)
setP2Atom(*args)
setRh(*args)
setScale(*args)
setScaleDa(*args)
setScaleRh(*args)
setSpreadDa(*args)
setSpreadRh(*args)
setThreshold(*args)
setXAtom(*args)
setYAtom(*args)
setZAtom(*args)
simulation(*args)
spreadDa(*args)
spreadRh(*args)
threshold(*args)
unRegister(*args)
updateValues(*args)
violations(*args)
xAtom(*args)
yAtom(*args)
zAtom(*args)
Properties inherited from VarTensor:
DaMax_
get = VarTensor_DaMax__get(...)
set = VarTensor_DaMax__set(...)
U
get = VarTensor_U_get(...)
set = VarTensor_U_set(...)
dO
get = VarTensor_dO_get(...)
set = VarTensor_dO_set(...)
dP1
get = VarTensor_dP1_get(...)
set = VarTensor_dP1_set(...)
dP2
get = VarTensor_dP2_get(...)
set = VarTensor_dP2_set(...)
dX
get = VarTensor_dX_get(...)
set = VarTensor_dX_set(...)
dY
get = VarTensor_dY_get(...)
set = VarTensor_dY_set(...)
dZ
get = VarTensor_dZ_get(...)
set = VarTensor_dZ_set(...)
instanceData_
get = VarTensor_instanceData__get(...)
set = VarTensor_instanceData__set(...)
modified
get = VarTensor_modified_get(...)
set = VarTensor_modified_set(...)
normQ
get = VarTensor_normQ_get(...)
set = VarTensor_normQ_set(...)
normQp1
get = VarTensor_normQp1_get(...)
set = VarTensor_normQp1_set(...)
normQp2
get = VarTensor_normQp2_get(...)
set = VarTensor_normQp2_set(...)
qp1
get = VarTensor_qp1_get(...)
set = VarTensor_qp1_set(...)
qp2
get = VarTensor_qp2_get(...)
set = VarTensor_qp2_set(...)
registeredSimulations
get = VarTensor_registeredSimulations_get(...)
set = VarTensor_registeredSimulations_set(...)
sqrtOneMinusZP1Squared
get = VarTensor_sqrtOneMinusZP1Squared_get(...)
set = VarTensor_sqrtOneMinusZP1Squared_set(...)
xp1hat
get = VarTensor_xp1hat_get(...)
set = VarTensor_xp1hat_set(...)
zp1hat
get = VarTensor_zp1hat_get(...)
set = VarTensor_zp1hat_set(...)
zp2hat
get = VarTensor_zp2hat_get(...)
set = VarTensor_zp2hat_set(...)
Data and other attributes inherited from VarTensor:
__dict__ = <dictproxy object at 0x13cc0f8>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'DaMax_': <built-in function VarTensor_DaMax__get>, 'U': <built-in function VarTensor_U_get>, 'dO': <built-in function VarTensor_dO_get>, 'dP1': <built-in function VarTensor_dP1_get>, 'dP2': <built-in function VarTensor_dP2_get>, 'dX': <built-in function VarTensor_dX_get>, 'dY': <built-in function VarTensor_dY_get>, 'dZ': <built-in function VarTensor_dZ_get>, 'instanceData_': <built-in function VarTensor_instanceData__get>, 'modified': <built-in function VarTensor_modified_get>, ...}
__swig_setmethods__ = {'DaMax_': <built-in function VarTensor_DaMax__set>, 'U': <built-in function VarTensor_U_set>, 'dO': <built-in function VarTensor_dO_set>, 'dP1': <built-in function VarTensor_dP1_set>, 'dP2': <built-in function VarTensor_dP2_set>, 'dX': <built-in function VarTensor_dX_set>, 'dY': <built-in function VarTensor_dY_set>, 'dZ': <built-in function VarTensor_dZ_set>, 'instanceData_': <built-in function VarTensor_instanceData__set>, 'modified': <built-in function VarTensor_modified_set>, ...}
__weakref__ = <attribute '__weakref__' of 'VarTensor' objects>
list of weak references to the object (if defined)

 
class VarTensor_LetterClass(__builtin__.object)
     Methods defined here:
Da(*args)
DaMax(*args)
Rh(*args)
__del__(self, destroy=<built-in function delete_VarTensor_LetterClass>)
__getattr__ lambda self, name
__init__(self, *args)
__repr__(self)
__setattr__ lambda self, name, value
accumDerivs(*args)
aveDa(*args)
aveRh(*args)
configTensorAtoms(*args)
energyMaybeDerivs0(*args)
energyMaybeDerivs1(*args)
ensembleAxis(*args)
ensembleDa(*args)
ensembleRh(*args)
expts(*args)
freedom(*args)
help(*args)
info(*args)
initDerivs(*args)
numRestraints(*args)
o2Atom(*args)
oAtom(*args)
p1Atom(*args)
p2Atom(*args)
rms(*args)
scaleDa(*args)
scaleRh(*args)
setDa(*args)
setDaMax(*args)
setEnsembleAxis(*args)
setEnsembleDa(*args)
setEnsembleRh(*args)
setExpts(*args)
setFreedom(*args)
setO2Atom(*args)
setOAtom(*args)
setP1Atom(*args)
setP2Atom(*args)
setRh(*args)
setScaleDa(*args)
setScaleRh(*args)
setSpreadDa(*args)
setSpreadRh(*args)
setXAtom(*args)
setYAtom(*args)
setZAtom(*args)
simulation(*args)
spreadDa(*args)
spreadRh(*args)
violations(*args)
xAtom(*args)
yAtom(*args)
zAtom(*args)
Properties defined here:
DaMax_
get = VarTensor_LetterClass_DaMax__get(...)
set = VarTensor_LetterClass_DaMax__set(...)
U
get = VarTensor_LetterClass_U_get(...)
set = VarTensor_LetterClass_U_set(...)
dO
get = VarTensor_LetterClass_dO_get(...)
set = VarTensor_LetterClass_dO_set(...)
dP1
get = VarTensor_LetterClass_dP1_get(...)
set = VarTensor_LetterClass_dP1_set(...)
dP2
get = VarTensor_LetterClass_dP2_get(...)
set = VarTensor_LetterClass_dP2_set(...)
dX
get = VarTensor_LetterClass_dX_get(...)
set = VarTensor_LetterClass_dX_set(...)
dY
get = VarTensor_LetterClass_dY_get(...)
set = VarTensor_LetterClass_dY_set(...)
dZ
get = VarTensor_LetterClass_dZ_get(...)
set = VarTensor_LetterClass_dZ_set(...)
normQ
get = VarTensor_LetterClass_normQ_get(...)
set = VarTensor_LetterClass_normQ_set(...)
normQp1
get = VarTensor_LetterClass_normQp1_get(...)
set = VarTensor_LetterClass_normQp1_set(...)
normQp2
get = VarTensor_LetterClass_normQp2_get(...)
set = VarTensor_LetterClass_normQp2_set(...)
qp1
get = VarTensor_LetterClass_qp1_get(...)
set = VarTensor_LetterClass_qp1_set(...)
qp2
get = VarTensor_LetterClass_qp2_get(...)
set = VarTensor_LetterClass_qp2_set(...)
sqrtOneMinusZP1Squared
get = VarTensor_LetterClass_sqrtOneMinusZP1Squared_get(...)
set = VarTensor_LetterClass_sqrtOneMinusZP1Squared_set(...)
xp1hat
get = VarTensor_LetterClass_xp1hat_get(...)
set = VarTensor_LetterClass_xp1hat_set(...)
zp1hat
get = VarTensor_LetterClass_zp1hat_get(...)
set = VarTensor_LetterClass_zp1hat_set(...)
zp2hat
get = VarTensor_LetterClass_zp2hat_get(...)
set = VarTensor_LetterClass_zp2hat_set(...)
Data and other attributes defined here:
__dict__ = <dictproxy object at 0x13a8de0>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'DaMax_': <built-in function VarTensor_LetterClass_DaMax__get>, 'U': <built-in function VarTensor_LetterClass_U_get>, 'dO': <built-in function VarTensor_LetterClass_dO_get>, 'dP1': <built-in function VarTensor_LetterClass_dP1_get>, 'dP2': <built-in function VarTensor_LetterClass_dP2_get>, 'dX': <built-in function VarTensor_LetterClass_dX_get>, 'dY': <built-in function VarTensor_LetterClass_dY_get>, 'dZ': <built-in function VarTensor_LetterClass_dZ_get>, 'normQ': <built-in function VarTensor_LetterClass_normQ_get>, 'normQp1': <built-in function VarTensor_LetterClass_normQp1_get>, ...}
__swig_setmethods__ = {'DaMax_': <built-in function VarTensor_LetterClass_DaMax__set>, 'U': <built-in function VarTensor_LetterClass_U_set>, 'dO': <built-in function VarTensor_LetterClass_dO_set>, 'dP1': <built-in function VarTensor_LetterClass_dP1_set>, 'dP2': <built-in function VarTensor_LetterClass_dP2_set>, 'dX': <built-in function VarTensor_LetterClass_dX_set>, 'dY': <built-in function VarTensor_LetterClass_dY_set>, 'dZ': <built-in function VarTensor_LetterClass_dZ_set>, 'normQ': <built-in function VarTensor_LetterClass_normQ_set>, 'normQp1': <built-in function VarTensor_LetterClass_normQp1_set>, ...}
__weakref__ = <attribute '__weakref__' of 'VarTensor_LetterClass' objects>
list of weak references to the object (if defined)

 
class VarTensor_LetterClassPtr(VarTensor_LetterClass)
    
Method resolution order:
VarTensor_LetterClassPtr
VarTensor_LetterClass
__builtin__.object
Methods defined here:
__init__(self, this)
Methods inherited from VarTensor_LetterClass:
Da(*args)
DaMax(*args)
Rh(*args)
__del__(self, destroy=<built-in function delete_VarTensor_LetterClass>)
__getattr__ lambda self, name
__repr__(self)
__setattr__ lambda self, name, value
accumDerivs(*args)
aveDa(*args)
aveRh(*args)
configTensorAtoms(*args)
energyMaybeDerivs0(*args)
energyMaybeDerivs1(*args)
ensembleAxis(*args)
ensembleDa(*args)
ensembleRh(*args)
expts(*args)
freedom(*args)
help(*args)
info(*args)
initDerivs(*args)
numRestraints(*args)
o2Atom(*args)
oAtom(*args)
p1Atom(*args)
p2Atom(*args)
rms(*args)
scaleDa(*args)
scaleRh(*args)
setDa(*args)
setDaMax(*args)
setEnsembleAxis(*args)
setEnsembleDa(*args)
setEnsembleRh(*args)
setExpts(*args)
setFreedom(*args)
setO2Atom(*args)
setOAtom(*args)
setP1Atom(*args)
setP2Atom(*args)
setRh(*args)
setScaleDa(*args)
setScaleRh(*args)
setSpreadDa(*args)
setSpreadRh(*args)
setXAtom(*args)
setYAtom(*args)
setZAtom(*args)
simulation(*args)
spreadDa(*args)
spreadRh(*args)
violations(*args)
xAtom(*args)
yAtom(*args)
zAtom(*args)
Properties inherited from VarTensor_LetterClass:
DaMax_
get = VarTensor_LetterClass_DaMax__get(...)
set = VarTensor_LetterClass_DaMax__set(...)
U
get = VarTensor_LetterClass_U_get(...)
set = VarTensor_LetterClass_U_set(...)
dO
get = VarTensor_LetterClass_dO_get(...)
set = VarTensor_LetterClass_dO_set(...)
dP1
get = VarTensor_LetterClass_dP1_get(...)
set = VarTensor_LetterClass_dP1_set(...)
dP2
get = VarTensor_LetterClass_dP2_get(...)
set = VarTensor_LetterClass_dP2_set(...)
dX
get = VarTensor_LetterClass_dX_get(...)
set = VarTensor_LetterClass_dX_set(...)
dY
get = VarTensor_LetterClass_dY_get(...)
set = VarTensor_LetterClass_dY_set(...)
dZ
get = VarTensor_LetterClass_dZ_get(...)
set = VarTensor_LetterClass_dZ_set(...)
normQ
get = VarTensor_LetterClass_normQ_get(...)
set = VarTensor_LetterClass_normQ_set(...)
normQp1
get = VarTensor_LetterClass_normQp1_get(...)
set = VarTensor_LetterClass_normQp1_set(...)
normQp2
get = VarTensor_LetterClass_normQp2_get(...)
set = VarTensor_LetterClass_normQp2_set(...)
qp1
get = VarTensor_LetterClass_qp1_get(...)
set = VarTensor_LetterClass_qp1_set(...)
qp2
get = VarTensor_LetterClass_qp2_get(...)
set = VarTensor_LetterClass_qp2_set(...)
sqrtOneMinusZP1Squared
get = VarTensor_LetterClass_sqrtOneMinusZP1Squared_get(...)
set = VarTensor_LetterClass_sqrtOneMinusZP1Squared_set(...)
xp1hat
get = VarTensor_LetterClass_xp1hat_get(...)
set = VarTensor_LetterClass_xp1hat_set(...)
zp1hat
get = VarTensor_LetterClass_zp1hat_get(...)
set = VarTensor_LetterClass_zp1hat_set(...)
zp2hat
get = VarTensor_LetterClass_zp2hat_get(...)
set = VarTensor_LetterClass_zp2hat_set(...)
Data and other attributes inherited from VarTensor_LetterClass:
__dict__ = <dictproxy object at 0x13a8cc8>
dictionary for instance variables (if defined)
__swig_getmethods__ = {'DaMax_': <built-in function VarTensor_LetterClass_DaMax__get>, 'U': <built-in function VarTensor_LetterClass_U_get>, 'dO': <built-in function VarTensor_LetterClass_dO_get>, 'dP1': <built-in function VarTensor_LetterClass_dP1_get>, 'dP2': <built-in function VarTensor_LetterClass_dP2_get>, 'dX': <built-in function VarTensor_LetterClass_dX_get>, 'dY': <built-in function VarTensor_LetterClass_dY_get>, 'dZ': <built-in function VarTensor_LetterClass_dZ_get>, 'normQ': <built-in function VarTensor_LetterClass_normQ_get>, 'normQp1': <built-in function VarTensor_LetterClass_normQp1_get>, ...}
__swig_setmethods__ = {'DaMax_': <built-in function VarTensor_LetterClass_DaMax__set>, 'U': <built-in function VarTensor_LetterClass_U_set>, 'dO': <built-in function VarTensor_LetterClass_dO_set>, 'dP1': <built-in function VarTensor_LetterClass_dP1_set>, 'dP2': <built-in function VarTensor_LetterClass_dP2_set>, 'dX': <built-in function VarTensor_LetterClass_dX_set>, 'dY': <built-in function VarTensor_LetterClass_dY_set>, 'dZ': <built-in function VarTensor_LetterClass_dZ_set>, 'normQ': <built-in function VarTensor_LetterClass_normQ_set>, 'normQp1': <built-in function VarTensor_LetterClass_normQp1_set>, ...}
__weakref__ = <attribute '__weakref__' of 'VarTensor_LetterClass' objects>
list of weak references to the object (if defined)

 
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