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- builtins.object
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- CDSList_DihedralRestraint
- DihedralPot
- DihedralPot_LetterClass
- Modified
- ModifiedBase
- Restraint_DihedralPot
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- Dihedral_Restraint
- rc_ptr_Dihedral_Restraint
class CDSList_DihedralRestraint(builtins.object) |
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CDSList_DihedralRestraint(*args)
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Methods defined here:
- __delitem__(self, *args, **kwargs) -> 'void'
- __getitem__(self, *args) -> 'CDSList< CDS::rc_ptr< Dihedral_Restraint > >'
- __getslice__(self, *args, **kwargs) -> 'CDSList< CDS::rc_ptr< Dihedral_Restraint > >'
- __init__(self, *args)
- Initialize self. See help(type(self)) for accurate signature.
- __len__(self, *args, **kwargs) -> 'int'
- __repr__ = _swig_repr(self)
- __setitem__(self, *args, **kwargs) -> 'void'
- append(self, *args, **kwargs) -> 'void'
- help(self, *args, **kwargs) -> 'String'
- remove(self, *args, **kwargs) -> 'void'
- removeAll(self, *args, **kwargs) -> 'void'
Static methods defined here:
- __swig_destroy__ = delete_CDSList_DihedralRestraint(...)
Data descriptors defined here:
- __dict__
dictionary for instance variables (if defined)
- __weakref__
list of weak references to the object (if defined)
- thisown
The membership flag
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class DihedralPot_LetterClass(builtins.object) |
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DihedralPot_LetterClass(*args, **kwargs)
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Methods defined here:
- __init__(self, *args, **kwargs)
- Initialize self. See help(type(self)) for accurate signature.
- __repr__ = _swig_repr(self)
- addRestraints(self, *args, **kwargs) -> 'void'
- allowBadRestraints(self, *args, **kwargs) -> 'bool const'
- calcEnergy(self, *args, **kwargs) -> 'float_type'
- calcEnergyAndDerivs(self, *args, **kwargs) -> 'float_type'
- comment(self, *args, **kwargs) -> 'String const'
- info(self, *args, **kwargs) -> 'String'
- numRestraints(self, *args, **kwargs) -> 'int'
- pyXplorHelp(self, *args, **kwargs) -> 'String'
- removeRestraint(self, *args, **kwargs) -> 'void'
- restraints(self, *args, **kwargs) -> 'CDSList< CDS::rc_ptr< Dihedral_Restraint > >'
- rms(self, *args, **kwargs) -> 'float_type'
- selection(self, *args, **kwargs) -> 'AtomSel'
- setAllowBadRestraints(self, *args, **kwargs) -> 'void'
- setComment(self, *args, **kwargs) -> 'void'
- setShowAllRestraints(self, *args, **kwargs) -> 'void'
- setVerbose(self, *args, **kwargs) -> 'void'
- showAllRestraints(self, *args, **kwargs) -> 'bool const'
- showViolations(self, *args, **kwargs) -> 'String'
- simulation(self, *args, **kwargs) -> 'Simulation *'
- verbose(self, *args, **kwargs) -> 'bool const'
- violations(self, *args, **kwargs) -> 'float_type'
Static methods defined here:
- __swig_destroy__ = delete_DihedralPot_LetterClass(...)
Data descriptors defined here:
- __dict__
dictionary for instance variables (if defined)
- __weakref__
list of weak references to the object (if defined)
- thisown
The membership flag
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class Dihedral_Restraint(Restraint_DihedralPot) |
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Dihedral_Restraint(*args, **kwargs)
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- Method resolution order:
- Dihedral_Restraint
- Restraint_DihedralPot
- builtins.object
Methods defined here:
- __init__(self, *args, **kwargs)
- Initialize self. See help(type(self)) for accurate signature.
- __repr__ = _swig_repr(self)
- calcd(self, *args, **kwargs) -> 'float_type'
- comment(self, *args, **kwargs) -> 'String'
- deriv(self, *args, **kwargs) -> 'void'
- energy(self, *args, **kwargs) -> 'float_type'
- err(self, *args, **kwargs) -> 'float_type'
- expon(self, *args, **kwargs) -> 'int'
- name(self, *args, **kwargs) -> 'String'
- obs(self, *args, **kwargs) -> 'float_type'
- scale(self, *args, **kwargs) -> 'float_type'
- setComment(self, *args, **kwargs) -> 'void'
- setErr(self, *args, **kwargs) -> 'void'
- setExpon(self, *args, **kwargs) -> 'void'
- setObs(self, *args, **kwargs) -> 'void'
- setScale(self, *args, **kwargs) -> 'void'
Static methods defined here:
- __swig_destroy__ = delete_Dihedral_Restraint(...)
Data descriptors defined here:
- dihedral
- thisown
The membership flag
Methods inherited from Restraint_DihedralPot:
- diff(self, *args, **kwargs) -> 'float_type'
- setName(self, *args, **kwargs) -> 'void'
- violated(self, *args, **kwargs) -> 'bool'
Data descriptors inherited from Restraint_DihedralPot:
- __dict__
dictionary for instance variables (if defined)
- __weakref__
list of weak references to the object (if defined)
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class Modified(builtins.object) |
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Modified(*args, **kwargs)
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Methods defined here:
- __call__(self, *args, **kwargs) -> 'int'
- Call self as a function.
- __init__(self, *args, **kwargs)
- Initialize self. See help(type(self)) for accurate signature.
- __repr__ = _swig_repr(self)
- asString(self, *args, **kwargs) -> 'String'
- clear(self, *args, **kwargs) -> 'void'
- set(self, *args, **kwargs) -> 'void'
- update(self, *args, **kwargs) -> 'void'
- value(self, *args, **kwargs) -> 'int'
Static methods defined here:
- __swig_destroy__ = delete_Modified(...)
Data descriptors defined here:
- __dict__
dictionary for instance variables (if defined)
- __weakref__
list of weak references to the object (if defined)
- thisown
The membership flag
Data and other attributes defined here:
- MOD_SELF = 1
- MOD_SIMULATION = 2
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class ModifiedBase(builtins.object) |
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ModifiedBase(*args, **kwargs)
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Methods defined here:
- __init__(self, *args, **kwargs)
- Initialize self. See help(type(self)) for accurate signature.
- __repr__ = _swig_repr(self)
- registerTo(self, *args, **kwargs) -> 'void'
- unRegister(self, *args, **kwargs) -> 'void'
- updateValues(self, *args, **kwargs) -> 'void'
Static methods defined here:
- __swig_destroy__ = delete_ModifiedBase(...)
Data descriptors defined here:
- __dict__
dictionary for instance variables (if defined)
- __weakref__
list of weak references to the object (if defined)
- modified
- registeredSimulations
- thisown
The membership flag
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class Restraint_DihedralPot(builtins.object) |
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Restraint_DihedralPot(*args, **kwargs)
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Methods defined here:
- __init__(self, *args, **kwargs)
- Initialize self. See help(type(self)) for accurate signature.
- __repr__ = _swig_repr(self)
- diff(self, *args, **kwargs) -> 'float_type'
- name(self, *args, **kwargs) -> 'String const'
- setName(self, *args, **kwargs) -> 'void'
- violated(self, *args, **kwargs) -> 'bool'
Static methods defined here:
- __swig_destroy__ = delete_Restraint_DihedralPot(...)
Data descriptors defined here:
- __dict__
dictionary for instance variables (if defined)
- __weakref__
list of weak references to the object (if defined)
- thisown
The membership flag
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class rc_ptr_Dihedral_Restraint(builtins.object) |
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rc_ptr_Dihedral_Restraint(*args)
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Methods defined here:
- __deref__(self, *args, **kwargs) -> 'Dihedral_Restraint *'
- __init__(self, *args)
- Initialize self. See help(type(self)) for accurate signature.
- __ref__(self, *args, **kwargs) -> 'Dihedral_Restraint &'
- __repr__ = _swig_repr(self)
- calcd(self, *args, **kwargs) -> 'float_type'
- comment(self, *args, **kwargs) -> 'String'
- count(self, *args, **kwargs) -> 'int'
- decr(self, *args, **kwargs) -> 'void'
- deriv(self, *args, **kwargs) -> 'void'
- diff(self, *args, **kwargs) -> 'float_type'
- energy(self, *args, **kwargs) -> 'float_type'
- err(self, *args, **kwargs) -> 'float_type'
- expon(self, *args, **kwargs) -> 'int'
- forceDelete(self, *args, **kwargs) -> 'void'
- incr(self, *args, **kwargs) -> 'void'
- name(self, *args, **kwargs) -> 'String'
- obs(self, *args, **kwargs) -> 'float_type'
- ptr(self, *args, **kwargs) -> 'Dihedral_Restraint *'
- release(self, *args, **kwargs) -> 'Dihedral_Restraint *'
- reset(self, *args, **kwargs) -> 'void'
- scale(self, *args, **kwargs) -> 'float_type'
- setComment(self, *args, **kwargs) -> 'void'
- setErr(self, *args, **kwargs) -> 'void'
- setExpon(self, *args, **kwargs) -> 'void'
- setName(self, *args, **kwargs) -> 'void'
- setObs(self, *args, **kwargs) -> 'void'
- setScale(self, *args, **kwargs) -> 'void'
- violated(self, *args, **kwargs) -> 'bool'
Static methods defined here:
- __swig_destroy__ = delete_rc_ptr_Dihedral_Restraint(...)
Data descriptors defined here:
- __dict__
dictionary for instance variables (if defined)
- __weakref__
list of weak references to the object (if defined)
- dihedral
- thisown
The membership flag
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realDihedralPot = class DihedralPot(builtins.object) |
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realDihedralPot(*args)
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Methods defined here:
- __deref__(self, *args, **kwargs) -> 'DihedralPot *'
- __init__(self, *args)
- __oldinit__ = __init__(self, *args, **kwargs)
- __ref__(self, *args, **kwargs) -> 'DihedralPot &'
- __repr__ = _swig_repr(self)
- addRestraints(self, *args, **kwargs) -> 'void'
- allowBadRestraints(self, *args, **kwargs) -> 'bool const'
- calcEnergy(self, *args, **kwargs) -> 'float_type'
- calcEnergyAndDerivs(self, *args, **kwargs) -> 'float_type'
- comment(self, *args, **kwargs) -> 'String const'
- decrRefCnt(self, *args, **kwargs) -> 'void'
- incrRefCnt(self, *args, **kwargs) -> 'void'
- info(self, *args, **kwargs) -> 'String'
- instanceData(self, *args, **kwargs) -> 'PyObject *'
- instanceName(self, *args, **kwargs) -> 'char const *'
- numRestraints(self, *args, **kwargs) -> 'int'
- potName(self, *args, **kwargs) -> 'char const *'
- pyXplorHelp(self, *args, **kwargs) -> 'String'
- refCnt(self, *args, **kwargs) -> 'int'
- registerInstanceData(self, *args, **kwargs) -> 'void'
- registerTo(self, *args, **kwargs) -> 'void'
- removeRestraint(self, *args, **kwargs) -> 'void'
- resetInstanceName(self, *args, **kwargs) -> 'void'
- resetPotName(self, *args, **kwargs) -> 'void'
- restraints(self, *args, **kwargs) -> 'CDSList< CDS::rc_ptr< Dihedral_Restraint > >'
- rms(self, *args, **kwargs) -> 'float_type'
- scale(self, *args, **kwargs) -> 'float_type const'
- selection(self, *args, **kwargs) -> 'AtomSel'
- setAllowBadRestraints(self, *args, **kwargs) -> 'void'
- setComment(self, *args, **kwargs) -> 'void'
- setScale(self, *args, **kwargs) -> 'void'
- setShowAllRestraints(self, *args, **kwargs) -> 'void'
- setThreshold(self, *args, **kwargs) -> 'void'
- setVerbose(self, *args, **kwargs) -> 'void'
- showAllRestraints(self, *args, **kwargs) -> 'bool const'
- showViolations(self, *args, **kwargs) -> 'String'
- simulation(self, *args, **kwargs) -> 'Simulation *'
- threshold(self, *args, **kwargs) -> 'float_type const'
- unRegister(self, *args, **kwargs) -> 'void'
- updateDelta(self, *args, **kwargs) -> 'void'
- updateValues(self, *args, **kwargs) -> 'void'
- verbose(self, *args, **kwargs) -> 'bool const'
- violations(self, *args, **kwargs) -> 'float_type'
Static methods defined here:
- __swig_destroy__ = delete_DihedralPot(...)
Data descriptors defined here:
- __dict__
dictionary for instance variables (if defined)
- __weakref__
list of weak references to the object (if defined)
- instanceDataCleanup
- instanceDataCreate
- instanceData_
- modified
- registeredSimulations
- thisown
The membership flag
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